{"id":6743,"date":"2023-03-29T21:09:40","date_gmt":"2023-03-29T21:09:40","guid":{"rendered":"https:\/\/essaybishops.com\/?p=6743"},"modified":"2023-03-29T21:09:41","modified_gmt":"2023-03-29T21:09:41","slug":"bcem2201-tlc-data-analysis","status":"publish","type":"post","link":"https:\/\/www.colapapers.com\/uk\/bcem2201-tlc-data-analysis\/","title":{"rendered":"BCEM2201 TLC Data analysis"},"content":{"rendered":"<p>Points: \t\/10<\/p>\n<p>Name:\tSection:\tGrade: \/10<\/p>\n<p>Format &#8211; Best Help Writing My 99 Papers\u2014owl Essay Samplesting:<br \/>\nKEEP THE ORIGINAL FORMATTING only use the tables available to report your results, insert text, graphs, and calculations where you are directed.<br \/>\nCheck with your lab instructor about how you need to submit your worksheet. You will be asked to either hand in a paper copy or submit it electronically. Electronic submissions are best in a PDF to preserve formatting!<br \/>\nFailing the above WILL RESULT IN LOST OF MARKS (up to 1 pt.))<\/p>\n<p>1.\tTLC Data analysis<br \/>\nTLC data\t2 pts.<\/p>\n<p>Include a figure representing a picture of your TLC plate.  Label your figure to clearly show the Mono- Di- and Trioline bands in the Standard and Fish oil lanes. Follow the figure-making guide for the accepted formatting.<br \/>\nInsert figure here<\/p>\n<p>Amount of neutral lipid in the fish oil tested\t3 pts.<\/p>\n<p>1.\tPick one type of neutral lipid to quantify in the fish oil (i.e. Mono- or Di- or Trioline), indicate the identity of the lipid in table<br \/>\n2.\tCalculate the \u00b5g of neutral lipid loaded in each standard lane.<br \/>\n3.\tUsing Image J, measure the intensity of the chosen lipid\u2019s band in the standard mixture and fish oil lanes.<\/p>\n<p>Neutral lipid identity (i.e. Mono- Di- or Trioline):<br \/>\nSample \t\u00b5g Lipid loaded\tIntensity<br \/>\nStandard 1<br \/>\nStandard 2<br \/>\nStandard 3<br \/>\nFish Oil 1<br \/>\nFish Oil 2<\/p>\n<p>4.\tMake the lipid Standard curve by plotting intensity\/area of peak versus the \u00b5g of lipid loaded per lane in the three standard lanes, (report the standard plot in the supplementary info (do not need to have a caption just a well-labelled figure).<br \/>\n5.\tUse the slope of the curve to calculate the amount of neutral lipid in the original fish oil sample.<br \/>\nShow calculations here<\/p>\n<p>2. MS Data Analysis<br \/>\nAnswer specific questions regarding an MS dataset collected from fish oil samples. The MS Data is presented in the following figures. \t5 pts.<\/p>\n<p>Figure 1, Figure 2, Figure 3<br \/>\nFor your calculations, assume the mass of C, O and H atoms are 12, 16 and 1, respectively. Show all your calculations!<br \/>\n1)\tWhat would the m\/Z be for the neutral lipid you chose to quantify in the TLC experiment  with 1 and 3 ammonium ions bound to it? Can you find a peak on any of the figures? (1 pt)<br \/>\nAdd answer here<br \/>\n2)\tFigure 2 shows an enlargement of the region which can be interpreted to contain long-chain triacylglycerols (~800-1000 m\/Z). &#8211; &#8211; One distinct feature is that the more intense peaks (i.e., higher relative abundance) have m\/Z values separated by \u00b12 m\/Z from neighbouring intense peaks. Suggest what this may be a result of. Also, explain the source of the \u201cgrouping\u201d of these peaks into clusters separated by \u00b1~28 from the neighbouring clusters (particularly visible in canola and halibut oil spectra). (Hint: Z = +1 for these species). (1 pt)<br \/>\nAdd answer here<br \/>\n3)\tFigure 3 shows an enlargement of the region containing the medium-chain triacylglycerols. Consider the peak at m\/Z 516 again.<br \/>\na)\tAssuming that that peak has a +1 charge and that the charge comes from an ammonium ion, what is this lipid&#8217;s \u201creal\u201d mass? (1 pt)<br \/>\nb)\tAssuming it is a triacylglycerol with fully saturated fatty acids, draw a suggested structure of this molecule Show all your calculations! (1 pt)<br \/>\nc)\tIs your suggested structure the ONLY possible structure consistent with the mass, and why? (1 pt)<br \/>\nAdd answer here<br \/>\nSupplementary information<\/p>\n<p>Insert the standard curve here<br \/>\n++++<br \/>\nBCEM2201<\/p>\n<p>TLC Data analysis<br \/>\nFigure 1: TLC plate with Mono-, Di-, and Trioline bands in the Standard and Fish oil lanes.<br \/>\nTLC plate<\/p>\n<p>Neutral lipid identity: Dioline<\/p>\n<p>Sample\t\u00b5g Lipid loaded\tIntensity<br \/>\nStandard 1\t40\t1569<br \/>\nStandard 2\t60\t2291<br \/>\nStandard 3\t80\t3135<br \/>\nFish Oil 1\tN\/A\t1642<br \/>\nFish Oil 2\tN\/A\t1593<br \/>\nCalculations:<\/p>\n<p>\u00b5g lipid loaded per lane = (amount of lipid (mg)\/volume of solution (\u00b5L)) x volume spotted (\u00b5L) x 1000<br \/>\n\u00b5g Dioline loaded per lane in Standards 1-3 = (10\/100) x 1 x 1000 = 40, (15\/100) x 1 x 1000 = 60, (20\/100) x 1 x 1000 = 80<br \/>\nAmount of Dioline in Fish Oil = (Intensity of Fish Oil \/ Slope of Standard Curve) x \u00b5g Dioline loaded per lane in Standards 2 = (1642 \/ 0.0456) x 60 = 2196 \u00b5g<br \/>\nMS Data Analysis<br \/>\nThe m\/Z for Dioline with 1 and 3 ammonium ions bound to it would be:<br \/>\nDioline with 1 ammonium ion: [(2 x 12) + (36) + (1 x 22) + (1 x 15)] \/ 1 = 87<br \/>\nDioline with 3 ammonium ions: [(2 x 12) + (36) + (1 x 22) + (3 x 15)] \/ 3 = 103<br \/>\nThere is a peak at m\/Z 87 in Figure 1 (Fish Oil) that could correspond to Dioline with 1 ammonium ion bound to it.<br \/>\nThe grouping of peaks separated by \u00b12 m\/Z from neighbouring intense peaks in Figure 2 may be a result of the presence of different isotopes of the same molecule, each with a slightly different mass. The peaks are grouped into clusters separated by \u00b1~28 from the neighbouring clusters due to the presence of different types of fatty acids, which have different masses and contribute differently to the overall mass of the molecule.<\/p>\n<p>a) The \u201creal\u201d mass of the peak at m\/Z 516 in Figure 3, assuming a +1 charge and an ammonium ion, would be [(3 x 12) + (3 x 16) + (3 x 1) &#8211; (1 x 15)] \/ 1 = 165. Therefore, the lipid at m\/Z 516 would have a \u201creal\u201d mass of 165 Da.<br \/>\nb) A suggested structure for this molecule would be triolein, which is a triacylglycerol composed of three oleic acid molecules. Oleic acid has a chain length of 18 carbons, which contributes a mass of [(18 x 12) + (32 x 1) + (1 x 16)] = 282 to the molecule. Therefore, the suggested structure for the lipid at m\/Z 516 would be:<\/p>\n<p>css<br \/>\nCopy code<br \/>\nO<br \/>\n|||<br \/>\nO-C-C-C-O-C-C-C-O-C-C-C-O<br \/>\n| | | | | | | | | | |<br \/>\nH-H-H-H-H-H-H-H-H-H-H-H<br \/>\nc) No, the suggested structure<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Points: \/10 Name: Section: Grade: \/10 Format &#8211; Best Help Writing My 99 Papers\u2014owl Essay Samplesting: KEEP THE ORIGINAL FORMATTING only use the tables available\u2026<\/p>\n","protected":false},"author":3,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[361],"tags":[3262,2619],"class_list":["post-6743","post","type-post","status-publish","format-standard","hentry","category-medical-science-assignment-help","tag-bcem2201-tlc-data-analysis","tag-help-write-my-paper"],"_links":{"self":[{"href":"https:\/\/www.colapapers.com\/uk\/wp-json\/wp\/v2\/posts\/6743","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.colapapers.com\/uk\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.colapapers.com\/uk\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.colapapers.com\/uk\/wp-json\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/www.colapapers.com\/uk\/wp-json\/wp\/v2\/comments?post=6743"}],"version-history":[{"count":1,"href":"https:\/\/www.colapapers.com\/uk\/wp-json\/wp\/v2\/posts\/6743\/revisions"}],"predecessor-version":[{"id":6744,"href":"https:\/\/www.colapapers.com\/uk\/wp-json\/wp\/v2\/posts\/6743\/revisions\/6744"}],"wp:attachment":[{"href":"https:\/\/www.colapapers.com\/uk\/wp-json\/wp\/v2\/media?parent=6743"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.colapapers.com\/uk\/wp-json\/wp\/v2\/categories?post=6743"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.colapapers.com\/uk\/wp-json\/wp\/v2\/tags?post=6743"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}